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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52938754_52939229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52938754 - 52939229

Intron Length:

476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

GTTAACATAATT

Flanking Amino Acid:

QTAEEKKSFMGPLKKDRIAK

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

74.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

85.3

0.79

0.7

77.4

31.4

Minor 5ss

32.7

-2

3.1

37.9

40.9

Minor BPS

54.7

0.22

1.8

76.07

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023065

52933399 - 52939346

5948

ENSAPLT00000015254

52932531 - 52939346

6816