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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5299570_5331735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5299570 - 5331735

Intron Length:

32166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTAG

5'SS Class:

major

3'SS Sequence:

TTTCTCTCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TACTCACTAATT

Flanking Amino Acid:

DRSQNPPQSKGCCFVTFYTR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

60.1

41.3

Major BPS

100

1.24

0.5

100

Major PPT

85.3

0.8

0.6

24.4

Minor 5ss

34.4

-1.8

3.5

49.3

Minor BPS

55.1

0.24

1.9

75.29

41.2

Associated Gene:

Gene:

CELF2

Ensembl Gene ID:

ENSAPLG00000010064

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028650

5175313 - 5426764

251452

ENSAPLT00000023819

5061983 - 5332374

270392

ENSAPLT00000034517

5061983 - 5428458

366476

ENSAPLT00000010552

5188947 - 5426764

237818

ENSAPLT00000031223

5188947 - 5428458

239512

ENSAPLT00000030189

5188947 - 5428090

239144