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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53032166_53032936_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53032166 - 53032936

Intron Length:

771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCCTCT

5'SS Class:

weak_major

3'SS Sequence:

CTCTCTCCGGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGAGAA

U12 Branch Point Sequence:

TCTCTCCGGAAG

Flanking Amino Acid:

GPKPKRLLLQQRKNQKYLRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.3

63.3

43.9

Major BPS

-0.3

34.1

31.6

Major PPT

0.25

1.1

63.8

31.7

Minor 5ss

52.3

0.08

2.9

74.3

Minor BPS

41.1

-0.8

1.8

46.36

Associated Gene:

Gene:

CBX7

Ensembl Gene ID:

ENSAPLG00000023146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047498

53025443 - 53036157

10715