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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53033106_53035421_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53033106 - 53035421

Intron Length:

2316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

GTGCTCTTATCT

Flanking Amino Acid:

WEAVQNTSKEADVDGSLPWI

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

Major BPS

79.1

0.72

69.3

38.4

Major PPT

88.4

0.86

0.7

83.7

24.3

Minor 5ss

-2.2

3.2

39.6

45.9

Minor BPS

59.6

0.38

1.6

73.83

42.9

Associated Gene:

Gene:

CBX7

Ensembl Gene ID:

ENSAPLG00000023146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047498

53025443 - 53036157

10715

ENSAPLT00000030563

53025443 - 53037072

11630