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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53044687_53044840_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53044687 - 53044840

Intron Length:

154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CCCGCCCCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

GTCTCGCCAACC

Flanking Amino Acid:

YLVKWKGWAIKYSTWEPEEN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

73.9

29.7

Major BPS

52.1

0.05

1.3

41.8

Major PPT

59.4

0.21

53.6

Minor 5ss

29.2

-2.4

3.1

32.8

35.7

Minor BPS

44.1

-0.4

2.4

60.33

44.6

Associated Gene:

Gene:

CBX6

Ensembl Gene ID:

ENSAPLG00000021019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039917

53044394 - 53053863

9470