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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53059940_53062938_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53059940 - 53062938

Intron Length:

2999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGGGGA

5'SS Class:

major

3'SS Sequence:

CCTCCGAGCACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

ACCCTGTTGACT

Flanking Amino Acid:

ALQDRIERIEQELPARANGS

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

60.3

40.6

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

59.9

0.22

52.7

35.4

Minor 5ss

22.1

-3.2

3.4

43.5

Minor BPS

-0.1

2.1

61.81

42.6

Associated Gene:

Gene:

NPTXR

Ensembl Gene ID:

ENSAPLG00000016553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042228

53059370 - 53065151

5782

ENSAPLT00000022828

53059370 - 53065675

6306