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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53063550_53063924_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53063550 - 53063924

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCCCA

5'SS Class:

major

3'SS Sequence:

TTTCCACCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TTCCACCCAAAG

Flanking Amino Acid:

NPLELLINDKVAQLPLSLKD

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.53

1.3

62.5

43.9

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

64.8

0.33

64.5

30.2

Minor 5ss

33.6

-1.9

2.9

40.6

45.1

Minor BPS

-0.8

48.76

43.8

Associated Gene:

Gene:

NPTXR

Ensembl Gene ID:

ENSAPLG00000016553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042228

53059370 - 53065151

5782

ENSAPLT00000022828

53059370 - 53065675

6306