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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53064105_53064202_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53064105 - 53064202

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCTCC

5'SS Class:

weak_major

3'SS Sequence:

TCCCCATCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CTAACCTGACCT

Flanking Amino Acid:

QGVIILGQEQDTLGGRFDAT

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.3

57.8

42.6

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

70.5

0.46

0.8

61.5

33.9

Minor 5ss

49.6

-0

2.7

69.2

41.6

Minor BPS

51.9

0.14

1.8

70.65

45.6

Associated Gene:

Gene:

NPTXR

Ensembl Gene ID:

ENSAPLG00000016553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022828

53059370 - 53065675

6306