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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53091173_53091755_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53091173 - 53091755

Intron Length:

583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TTATCTTTGTCT

Flanking Amino Acid:

PPTPTALQPSPALDEEPHVR

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

68.7

38.1

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

76.4

0.59

0.8

73.7

31.4

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

48.9

-0

3.5

83.55

37.7

Associated Gene:

Gene:

GTPBP1

Ensembl Gene ID:

ENSAPLG00000014138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046932

53090675 - 53104440

13766

ENSAPLT00000041611

53052787 - 53103727

50941