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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53091954_53092427_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53091954 - 53092427

Intron Length:

474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTAACCGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

CCCTTTGTAACC

Flanking Amino Acid:

RTKAVGTITKLLQTTNNSPM

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.9

36.4

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

66.2

0.37

1.1

58.7

42.6

Minor 5ss

31.2

-2.1

3.7

47.6

Minor BPS

48.3

-0.1

56.25

43.4

Associated Gene:

Gene:

GTPBP1

Ensembl Gene ID:

ENSAPLG00000014138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041611

53052787 - 53103727

50941

ENSAPLT00000027666

53090675 - 53103727

13053

ENSAPLT00000014732

53052787 - 53103727

50941

ENSAPLT00000046932

53090675 - 53104440

13766