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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53109300_53109435_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53109300 - 53109435

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGAGA

5'SS Class:

major

3'SS Sequence:

TGCACTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACGTAAT

U12 Branch Point Sequence:

GTTCTCTGCACT

Flanking Amino Acid:

GYEAVWWDKRRDVNVIALSN

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

64.2

41.4

Major BPS

0.32

1.2

63.6

40.3

Major PPT

66.6

0.37

0.9

38.3

Minor 5ss

37.8

-1.4

3.1

49.1

46.7

Minor BPS

51.6

0.13

1.9

74.97

41.3

Associated Gene:

Gene:

JOSD1

Ensembl Gene ID:

ENSAPLG00000014238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014837

53104741 - 53111476

6736