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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53109631_53110457_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53109631 - 53110457

Intron Length:

827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TACCTTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TCTGTTTTACCT

Flanking Amino Acid:

PEWIGGESELRKFLKHQLRG

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.7

83.9

30.3

Major BPS

68.8

0.47

1.2

63.4

Major PPT

75.2

0.57

0.9

69.1

36.6

Minor 5ss

38.4

-1.3

2.9

48.7

47.5

Minor BPS

57.3

0.31

1.7

74.22

43.6

Associated Gene:

Gene:

JOSD1

Ensembl Gene ID:

ENSAPLG00000014238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014837

53104741 - 53111476

6736