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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53115148_53115999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53115148 - 53115999

Intron Length:

852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

TTTCTGGAAAGC

Flanking Amino Acid:

RLKVDILLDMLSETTAESHL

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.4

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

76.3

0.59

0.9

69.7

36.7

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

35.9

-1

2.7

54.35

44.1

Associated Gene:

Gene:

CBY1

Ensembl Gene ID:

ENSAPLG00000014277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014897

53115067 - 53116540

1474