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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53134722_53135326_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53134722 - 53135326

Intron Length:

605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TGTAATTTGAGA

Flanking Amino Acid:

QEESGYQDDEESFFQDIDLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.2

33.8

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

43.2

-0.7

2.9

57.8

46.8

Minor BPS

47.7

-0.1

1.8

60.69

39.1

Associated Gene:

Gene:

DMC1

Ensembl Gene ID:

ENSAPLG00000014309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024826

53128937 - 53146289

17353

ENSAPLT00000014923

53131834 - 53146289

14456