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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53135372_53138282_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53135372 - 53138282

Intron Length:

2911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

ACTTTCTTTACA

Flanking Amino Acid:

DIDLLQKHGINVADIKKLKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

85.6

30.4

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

86.2

0.81

0.7

80.2

31.2

Minor 5ss

44.2

-0.6

2.9

66.4

38.5

Minor BPS

66.3

0.51

1.6

72.91

38.8

Associated Gene:

Gene:

DMC1

Ensembl Gene ID:

ENSAPLG00000014309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024826

53128937 - 53146289

17353

ENSAPLT00000014923

53131834 - 53146289

14456