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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53138430_53138730_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53138430 - 53138730

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGCCAC

5'SS Class:

major

3'SS Sequence:

TGGTCTGCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

GTCTCATGTACT

Flanking Amino Acid:

KIKEAANKLIEPGFLTAFEY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.43

1.1

41.1

Major BPS

0.3

62.3

30.4

Major PPT

64.7

0.33

0.9

62.3

39.8

Minor 5ss

40.7

-1

3.1

56.9

41.9

Minor BPS

48.6

-0

2.1

71.25

44.8

Associated Gene:

Gene:

DMC1

Ensembl Gene ID:

ENSAPLG00000014309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024826

53128937 - 53146289

17353

ENSAPLT00000014923

53131834 - 53146289

14456