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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53139422_53140297_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53139422 - 53140297

Intron Length:

876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCATTTAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTTTCTTCATT

Flanking Amino Acid:

ESMAITEAFGEFRTGKTQLS

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

73.2

0.52

0.9

69.5

35.2

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

73.4

0.82

1.7

91.07

32.9

Associated Gene:

Gene:

DMC1

Ensembl Gene ID:

ENSAPLG00000014309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024826

53128937 - 53146289

17353

ENSAPLT00000014923

53131834 - 53146289

14456