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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53140340_53141521_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53140340 - 53141521

Intron Length:

1182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCATTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCTGCTTCATT

Flanking Amino Acid:

GKTQLSHTLCVTAQLPGPSG

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

100

1.24

0.5

100

Major PPT

74.9

0.56

0.9

66.8

39.3

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

56.4

0.28

2.2

79.08

43.9

Associated Gene:

Gene:

DMC1

Ensembl Gene ID:

ENSAPLG00000014309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014923

53131834 - 53146289

14456

ENSAPLT00000024826

53128937 - 53146289

17353