Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_53143168_53143264_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53143168 - 53143264

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACAAGAC

5'SS Class:

major

3'SS Sequence:

AATTCCAATGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

ATTTACTTATCC

Flanking Amino Acid:

HEEAGIFKLLIIDSIMALFR

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.1

55.7

35.8

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

63.6

0.31

57.2

37.9

Minor 5ss

29.1

-2.4

3.6

37.7

42.5

Minor BPS

66.1

0.48

1.8

78.12

37.1

Associated Gene:

Gene:

DMC1

Ensembl Gene ID:

ENSAPLG00000014309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024826

53128937 - 53146289

17353

ENSAPLT00000014923

53131834 - 53146289

14456