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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53143380_53144204_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53143380 - 53144204

Intron Length:

825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTGGCGTTATTT

Flanking Amino Acid:

MLSRLQKISEEYNVAVFVTN

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

86.6

0.82

0.7

81.5

28.7

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

47.9

-0

2.3

71.02

46.6

Associated Gene:

Gene:

DMC1

Ensembl Gene ID:

ENSAPLG00000014309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024826

53128937 - 53146289

17353

ENSAPLT00000014923

53131834 - 53146289

14456