Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_53144266_53144839_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53144266 - 53144839

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGATAC

5'SS Class:

major

3'SS Sequence:

CTTGCTAATTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

GAATCATCAACA

Flanking Amino Acid:

QMTADPGATMTFQADPKKPI

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.3

72.1

34.3

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

69.5

0.44

0.9

67.3

38.1

Minor 5ss

39.6

-1.2

3.1

Minor BPS

53.9

0.12

1.8

64.71

40.5

Associated Gene:

Gene:

DMC1

Ensembl Gene ID:

ENSAPLG00000014309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024826

53128937 - 53146289

17353

ENSAPLT00000014923

53131834 - 53146289

14456