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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53156485_53158364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53156485 - 53158364

Intron Length:

1880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TCTGTTTTGAAG

Flanking Amino Acid:

KGPQIRDLERGVEICIATPG

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.1

25.8

Major BPS

77.3

0.68

81.5

Major PPT

0.61

78.5

33.7

Minor 5ss

39.6

-1.2

2.8

49.5

46.6

Minor BPS

48.9

-0.2

1.6

54.07

41.8

Associated Gene:

Gene:

DDX17

Ensembl Gene ID:

ENSAPLG00000014334

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014978

53148742 - 53166894

18153

ENSAPLT00000031708

53148742 - 53167276

18535