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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53200065_53200165_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53200065 - 53200165

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCCTCTGAA

5'SS Class:

weak_major

3'SS Sequence:

GTGTTTTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

GTGGGCTTAATT

Flanking Amino Acid:

SGWGRELFCWWASPPLSGVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.2

0.05

1.4

48.9

44.5

Major BPS

69.2

0.48

1.3

71.9

Major PPT

77.3

0.61

0.9

69.5

41.6

Minor 5ss

28.3

-2.5

3.9

31.3

42.9

Minor BPS

56.9

0.29

1.9

72.1

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045295

53194312 - 53200216

5905