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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53244622_53245192_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53244622 - 53245192

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

TGCGTCACCTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

TGCTCTGTGACT

Flanking Amino Acid:

PGLLAARSSKGANRKVLLDL

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

0.22

1.2

52.4

43.3

Major PPT

55.3

0.12

1.1

57.4

37.7

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

55.4

0.25

2.1

75.34

Associated Gene:

Gene:

PLA2G6

Ensembl Gene ID:

ENSAPLG00000014840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029873

53239653 - 53251371

11719

ENSAPLT00000015473

53239653 - 53251371

11719