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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53244622_53246862_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53244622 - 53246862

Intron Length:

2241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

CATGGCCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CATTTTTTATTT

Flanking Amino Acid:

PGLLAARSSKGYGDLLYASA

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

62.6

0.28

0.9

51.6

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

58.5

0.34

1.6

71.82

40.2

Associated Gene:

Gene:

PLA2G6

Ensembl Gene ID:

ENSAPLG00000014840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015475

53239653 - 53251371

11719