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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53246954_53247087_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53246954 - 53247087

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCTCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAG

U12 Branch Point Sequence:

AGGATCTGAGAT

Flanking Amino Acid:

VMDSPREGGRSYDRLLCLDG

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

58.6

0.21

1.5

57.1

41.8

Major PPT

79.9

0.67

0.8

73.6

31.4

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

-0.4

1.7

54.22

40.6

Associated Gene:

Gene:

PLA2G6

Ensembl Gene ID:

ENSAPLG00000014840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029873

53239653 - 53251371

11719

ENSAPLT00000015475

53239653 - 53251371

11719

ENSAPLT00000015473

53239653 - 53251371

11719