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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53247893_53248080_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53247893 - 53248080

Intron Length:

188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

TGCTGAAAGAGG

Flanking Amino Acid:

ASFKPLTRPEDQLVWRAARC

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

75.1

41.1

Major BPS

0.42

1.1

57.3

41.7

Major PPT

81.2

0.7

0.8

77.8

31.1

Minor 5ss

37.2

-1.4

3.1

49.5

46.7

Minor BPS

29.6

-1.7

2.2

32.92

40.6

Associated Gene:

Gene:

PLA2G6

Ensembl Gene ID:

ENSAPLG00000014840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015475

53239653 - 53251371

11719

ENSAPLT00000015473

53239653 - 53251371

11719

ENSAPLT00000029873

53239653 - 53251371

11719