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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53250669_53252850_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53250669 - 53252850

Intron Length:

2182

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCACTGCGC

5'SS Class:

weak_major

3'SS Sequence:

GCCCTGCCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

GCAAAATTAACG

Flanking Amino Acid:

SCLCSTPRDKTILEQFNPAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.3

53.3

40.6

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

68.9

0.43

0.9

60.4

35.5

Minor 5ss

21.5

-3.3

4.1

32.4

40.2

Minor BPS

46.3

-0.4

1.9

48.56

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048418

53250576 - 53253340

2765