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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53351471_53351598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53351471 - 53351598

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCTTT

5'SS Class:

major

3'SS Sequence:

CTTCCCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTTAC

U12 Branch Point Sequence:

CCCCCCTTACCC

Flanking Amino Acid:

APRAPSASPLAHHPVSRLSH

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

75.2

37.4

Major BPS

56.6

0.16

1.1

48.9

36.2

Major PPT

85.8

0.8

0.7

80.2

Minor 5ss

44.8

-0.6

3.1

65.3

45.9

Minor BPS

54.4

0.12

1.7

59.26

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045635

53340985 - 53355337

14353