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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53352084_53352494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53352084 - 53352494

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCGCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

AGACCCTCACAC

Flanking Amino Acid:

PPSSPKPQLKSSCKENPFNR

Intron Amino Acid Position:

697

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

41.6

Major BPS

66.8

0.42

1.1

37.7

Major PPT

75.3

0.57

0.8

68.8

31.7

Minor 5ss

30.7

-2.2

3.2

37.8

47.1

Minor BPS

-0.4

1.8

50.25

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045635

53340985 - 53355337

14353