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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53352630_53352731_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53352630 - 53352731

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGGG

5'SS Class:

major

3'SS Sequence:

TGGGGTTCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

GTGGTGGTAACG

Flanking Amino Acid:

GHGFPLIKRKVQTDQYIPEE

Intron Amino Acid Position:

742

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

63.2

41.7

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

59.7

0.22

1.1

54.2

45.8

Minor 5ss

29.2

-2.4

3.4

38.5

46.6

Minor BPS

39.7

-0.9

2.5

46.67

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045635

53340985 - 53355337

14353