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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53353161_53353435_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53353161 - 53353435

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGCACA

5'SS Class:

major

3'SS Sequence:

CCTTCCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGCCAT

U12 Branch Point Sequence:

GTCCCCTTCCCT

Flanking Amino Acid:

LVRHESELIYIFKQQNLEQR

Intron Amino Acid Position:

814

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

73.6

Major BPS

46.8

-0.2

1.4

53.8

41.9

Major PPT

82.9

0.74

0.7

76.7

25.3

Minor 5ss

42.1

-0.9

2.8

54.7

42.4

Minor BPS

41.6

-0.5

3.6

69.9

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045635

53340985 - 53355337

14353