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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53353510_53353636_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53353510 - 53353636

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAG

5'SS Class:

major

3'SS Sequence:

TTTGGCTCGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

CTGTCCTTCCTT

Flanking Amino Acid:

YELRCLLNKPEKDWTEEDRV

Intron Amino Acid Position:

839

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

62.9

43.2

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

70.5

0.46

66.1

40.8

Minor 5ss

29.5

-2.4

3.3

37.6

47.1

Minor BPS

42.6

-0.4

3.6

70.86

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045635

53340985 - 53355337

14353