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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53353752_53353888_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53353752 - 53353888

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCGAAT

U12 Branch Point Sequence:

AATCGCTGAGCT

Flanking Amino Acid:

IVNCLDEDRQREEEEDKMLE

Intron Amino Acid Position:

877

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

51.8

0.05

1.5

63.6

42.5

Major PPT

93.2

0.97

0.6

92.2

18.2

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

46.4

-0.2

2.1

66.62

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045635

53340985 - 53355337

14353