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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53353936_53354215_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53353936 - 53354215

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCACCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTAAC

U12 Branch Point Sequence:

GACCCGCTAACC

Flanking Amino Acid:

KMLEAMIKRKEFHKETEAEG

Intron Amino Acid Position:

893

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

82.1

Major BPS

57.1

0.18

1.1

Major PPT

72.5

0.51

0.9

63.3

38.1

Minor 5ss

32.6

-2

3.1

42.1

Minor BPS

44.4

-0.4

2.3

54.81

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045635

53340985 - 53355337

14353