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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53358596_53358916_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53358596 - 53358916

Intron Length:

321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCAATAT

U12 Branch Point Sequence:

CTGACGTCAATA

Flanking Amino Acid:

QRRCLMECLERGDALPLQCH

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

54.9

0.12

1.2

51.6

42.3

Major PPT

83.2

0.75

0.9

77.3

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

45.1

-0.3

2.2

55.87

43.7

Associated Gene:

Gene:

C22orf23

Ensembl Gene ID:

ENSAPLG00000015251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015895

53356668 - 53447426

90759