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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53359200_53447240_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53359200 - 53447240

Intron Length:

88041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCTGGG

5'SS Class:

major

3'SS Sequence:

GGCGGGCTCGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTCCAT

U12 Branch Point Sequence:

CCCTCCTCCATG

Flanking Amino Acid:

ECHPCLRAGQGGGRARYSPK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.7

0.37

1.2

54.2

Major BPS

52.4

0.06

1.3

41.7

Major PPT

43.5

-0.3

1.7

39.9

Minor 5ss

31.1

-2.2

3.3

40.6

45.6

Minor BPS

45.4

-0.5

46.49

Associated Gene:

Gene:

C22orf23

Ensembl Gene ID:

ENSAPLG00000015251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015895

53356668 - 53447426

90759