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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53359379_53360165_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53359379 - 53360165

Intron Length:

787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGAGAG

5'SS Class:

major

3'SS Sequence:

CTCTGCCCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

GTTGCCTTACAT

Flanking Amino Acid:

QGDKMSDNEDNFDGDDFDDV

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

64.9

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

72.9

0.52

0.8

69.4

31.3

Minor 5ss

-2.8

3.2

29.5

37.1

Minor BPS

59.4

0.37

1.9

77.97

Associated Gene:

Gene:

POLR2F

Ensembl Gene ID:

ENSAPLG00000015235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015885

53358867 - 53363918

5052