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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53400118_53401430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53400118 - 53401430

Intron Length:

1313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

GCTGGGGTGACG

Flanking Amino Acid:

MFFKGAQERCGADG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

26.9

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

77.9

0.63

0.8

72.3

32.3

Minor 5ss

35.7

-1.6

2.6

41.3

45.3

Minor BPS

33.1

-1.4

2.7

38.2

45.3

Associated Gene:

Gene:

PICK1

Ensembl Gene ID:

ENSAPLG00000015117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015805

53400106 - 53410443

10338