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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53401520_53401866_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53401520 - 53401866

Intron Length:

347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

TTTCTCGTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAA

U12 Branch Point Sequence:

CCATAATCAATT

Flanking Amino Acid:

ELDYDIEEDKLGIPTVPGTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

68.2

36.6

Major BPS

71.2

0.53

72.3

32.8

Major PPT

80.8

0.69

0.8

73.6

Minor 5ss

32.8

-2

3.3

51.5

44.9

Minor BPS

45.1

-0.2

1.9

59.26

43.9

Associated Gene:

Gene:

PICK1

Ensembl Gene ID:

ENSAPLG00000015117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037223

53400242 - 53410443

10202

ENSAPLT00000015805

53400106 - 53410443

10338