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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53401979_53402415_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53401979 - 53402415

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCACT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCCGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TGATTCCAGACT

Flanking Amino Acid:

QYCPCLYIVQVFDNTPAALD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

75.3

40.8

Major BPS

78.8

0.71

67.6

40.6

Major PPT

67.5

0.39

0.9

34.8

Minor 5ss

40.6

-1

3.2

58.1

46.3

Minor BPS

47.7

-0.1

69.01

41.8

Associated Gene:

Gene:

PICK1

Ensembl Gene ID:

ENSAPLG00000015117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037223

53400242 - 53410443

10202

ENSAPLT00000015805

53400106 - 53410443

10338