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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53402736_53404056_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53402736 - 53404056

Intron Length:

1321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGCCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TGACCCTGATTT

Flanking Amino Acid:

DPKQGKSLDIVLKKVKHRLV

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

75.8

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

77.4

0.62

0.9

74.6

36.4

Minor 5ss

38.4

-1.3

3.4

58.3

45.6

Minor BPS

50.5

0.09

1.7

68.56

41.8

Associated Gene:

Gene:

PICK1

Ensembl Gene ID:

ENSAPLG00000015117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037223

53400242 - 53410443

10202

ENSAPLT00000015805

53400106 - 53410443

10338