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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53404147_53404492_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53404147 - 53404492

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TATTTCCATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TGATTCTTATTT

Flanking Amino Acid:

LGLSRAILCNDGLVKRLEEL

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

91.2

27.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

76.8

0.6

0.9

75.4

34.4

Minor 5ss

42.1

-0.9

2.9

61.3

Minor BPS

64.1

0.52

1.6

77.14

39.6

Associated Gene:

Gene:

PICK1

Ensembl Gene ID:

ENSAPLG00000015117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015805

53400106 - 53410443

10338

ENSAPLT00000037223

53400242 - 53410443

10202