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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53405171_53405942_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53405171 - 53405942

Intron Length:

772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAAGTAC

5'SS Class:

major

3'SS Sequence:

GTTTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTGACCTTACGT

Flanking Amino Acid:

GIHLLKTIKPMLTDLNTYLN

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

63.7

37.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

83.9

0.76

0.8

77.6

31.1

Minor 5ss

36.9

-1.5

3.4

49.9

46.8

Minor BPS

56.4

0.28

76.34

46.1

Associated Gene:

Gene:

PICK1

Ensembl Gene ID:

ENSAPLG00000015117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015805

53400106 - 53410443

10338

ENSAPLT00000037223

53400242 - 53410443

10202