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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53406036_53406774_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53406036 - 53406774

Intron Length:

739

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCTGC

5'SS Class:

major

3'SS Sequence:

TAATCCTGTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATC

Flanking Amino Acid:

KYLDVKFEYLSYCLKVKEMD

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

61.9

39.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

60.2

0.23

1.2

60.7

Minor 5ss

38.9

-1.2

46.9

Minor BPS

74.9

0.76

1.1

77.11

33.4

Associated Gene:

Gene:

PICK1

Ensembl Gene ID:

ENSAPLG00000015117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037223

53400242 - 53410443

10202

ENSAPLT00000015805

53400106 - 53410443

10338