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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53406826_53408270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53406826 - 53408270

Intron Length:

1445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

CGTGTTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

AGTCTCTAAAAC

Flanking Amino Acid:

EMDDEEYSCIALGEPLYRVS

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

69.6

34.4

Major BPS

0.57

73.6

28.6

Major PPT

72.4

0.5

1.1

68.6

Minor 5ss

34.1

-1.8

2.7

44.2

37.1

Minor BPS

49.3

-0

1.7

60.15

38.4

Associated Gene:

Gene:

PICK1

Ensembl Gene ID:

ENSAPLG00000015117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037223

53400242 - 53410443

10202

ENSAPLT00000015805

53400106 - 53410443

10338