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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53408416_53408672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53408416 - 53408672

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GTCTCCGCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTCACCTGATTT

Flanking Amino Acid:

EKIELLDQKHVQDIVFQLQR

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.8

79.6

35.4

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

72.7

0.51

0.9

65.6

36.1

Minor 5ss

-1.8

2.8

39.3

40.3

Minor BPS

54.2

0.21

1.8

73.55

43.5

Associated Gene:

Gene:

PICK1

Ensembl Gene ID:

ENSAPLG00000015117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037223

53400242 - 53410443

10202

ENSAPLT00000015805

53400106 - 53410443

10338