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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53416138_53416359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53416138 - 53416359

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGCTT

5'SS Class:

major

3'SS Sequence:

TGCTTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCCTAC

U12 Branch Point Sequence:

GGTCTCCTACTC

Flanking Amino Acid:

SIMLAMLYGTGPVCSIMVNQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

71.4

39.9

Major BPS

48.6

-0

1.2

47.8

37.3

Major PPT

82.1

0.72

0.8

73.3

37.2

Minor 5ss

31.3

-2.1

3.5

47.3

48.1

Minor BPS

44.7

-0.4

1.8

53.75

37.8

Associated Gene:

Gene:

SLC16A8

Ensembl Gene ID:

ENSAPLG00000015097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015744

53412113 - 53416638

4526