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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53431899_53432336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53431899 - 53432336

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

GTCCCCGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAG

U12 Branch Point Sequence:

TGAGCAGCGACA

Flanking Amino Acid:

VQRNYGFQIHTKDAIFTLSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.3

69.3

35.8

Major BPS

46.9

-0.1

1.7

42.8

49.4

Major PPT

69.1

0.43

0.9

61.5

34.9

Minor 5ss

29.9

-2.3

3.1

35.2

33.9

Minor BPS

38.1

-0.9

2.3

49.39

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033934

53422680 - 53436540

13861

ENSAPLT00000023638

53424256 - 53434098

9843

ENSAPLT00000041908

53424256 - 53435863

11608

ENSAPLT00000037539

53424256 - 53436540

12285