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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53433234_53433791_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53433234 - 53433791

Intron Length:

558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGGAGC

5'SS Class:

major

3'SS Sequence:

CTCTCTCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

CACACAGTAACC

Flanking Amino Acid:

MPSRWREPDLLNFKKGW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.2

41.8

Major BPS

54.4

0.11

1.2

36.4

Major PPT

81.6

0.71

0.7

73.1

31.8

Minor 5ss

-2.4

2.9

35.2

40.9

Minor BPS

44.2

-0.4

2.2

53.28

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023638

53424256 - 53434098

9843